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NIMH Data Archive
NDA ABCD CCF OAI NIAAADA AMP SCZ HEAL

Brain and Tissue Bank Form

4,411 Shared Subjects

N/A
Clinical Assessments
Summary
02/29/2012
nichd_btb02
03/15/2024
View Change History
02
Definition
Submission Template
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR* pseudoguid
src_subject_id String 20 Required Subject ID how it's defined in lab/project SHOWUMBN, brainid
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0::1440 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month. agedeath
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY
sex String 20 Required Sex of subject at birth M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported gender, sex
Query race String 30 Recommended Race of study subject American Indian/Alaska Native; Asian; Hawaiian or Pacific Islander; Black or African American; White; More than one race; Unknown or not reported; Other Non-White; Other
ethnic_group String 255 Recommended Ethnic group
grade_highed String 50 Recommended Grade/Highest education 1= Less than 6th grade; 2= Some high school; 3= High school diploma or GED; 4= Some college, no degree; 5= Associates degree; 6= Bachelors degree; 7= Some graduate school; 8= Masters degree and above; 9= Some post-graduate training, no degree; 10= Completed 8th grade, no high school; 11= High school; 12= College or University; 13= Graduate school; 14= Other; 15= Less than high school; 99= Information not available education
disorder String 50 Recommended Disorder primarydx
cdeathoff String 50 Recommended Cause of Death
Query death027 Integer Recommended Manner of death 1::9; -888; -999 1=Natural; 2=Homicide; 3=Accident; 4=Pending investigation; 5=Suicide; 6=Could not be determined; 8=Not Collected; 9=Not Documented; -888=Not Applicable; -999=Missing
Query pminterval Integer Recommended Post mortem interval in hours -9 = Missing pmi
Query ph Float Recommended tissue pH -9 = Missing
sample_id_original String 100 Recommended Original, user-defined Sample ID
celltype String 50 Recommended Cell type
br_reg String 50 Recommended Brain region
Query rindlpfc Float Recommended RIN number for DLPFC
Query agedays Integer Recommended Age in months
Query bmi Float Recommended body mass index of subject -9 = Missing
historyrec String 4,000 Recommended Brief Medical History
Query surgoraut String 20 Recommended surgery or autopsy
Query ageyears Integer Recommended Age in years
adi_r String 10 Recommended Is ADI-R information available?
hbsag String 25 Recommended hepatitis B surface antigen test results HBsAg
hiv String 25 Recommended HIV test results
Query mravail Integer Recommended medical records available
Query npavail Integer Recommended neuropathology report available
Query adiravail Integer Recommended ADI-R available
Query rincortex Float Recommended RIN number for cortex
Query rincbell Float Recommended RIN number for cerebellum
Query s201 Integer Recommended Frozen CEREBRUM- HC Section 1 (Method 2)
Query s203 Integer Recommended Frozen CEREBRUM- HC Section 3 (Method 2)
Query s205 Integer Recommended Frozen CEREBRUM- HC Section 5 (Method 2)
Query s207 Integer Recommended Frozen CEREBRUM- HC Section 7 (Method 2)
Query s209 Integer Recommended Frozen CEREBRUM- HC Section 9 (Method 2)
Query s211 Integer Recommended Frozen CEREBRUM- HC Section 11 (Method 2)
Query s213 Integer Recommended Frozen CEREBRUM- HC Section 13 (Method 2)
Query s215 Integer Recommended Frozen CEREBRUM- HC Section 15 (Method 2)
Query s217 Integer Recommended Frozen CEREBRUM- HC Section 17 (Method 2)
Query s219 Integer Recommended Frozen CEREBRUM- HC Section 19 (Method 2)
Query s221 Integer Recommended Frozen CEREBRUM- HC Section 21 (Method 2)
Query s223 Integer Recommended Frozen CEREBRUM- HC Section 23 (Method 2)
Query s225 Integer Recommended Frozen CEREBRUM- HC Section 25 (Method 2)
Query s227 Integer Recommended Frozen CEREBRUM- HC Section 27 (Method 2)
Query s229 Integer Recommended Frozen CEREBRUM- HC Section 29 (Method 2)
Query s231 Integer Recommended Frozen CEREBRUM- HC Section 31 (Method 2)
Query s232 Integer Recommended Frozen MID BRAIN/PONS- Section 1 (Method 2)
Query s234 Integer Recommended Frozen MID BRAIN/PONS- Section 3 (Method 2)
Query s236 Integer Recommended Frozen MID BRAIN/PONS- Section 5 (Method 2)
Query s238 Integer Recommended Frozen MID BRAIN/PONS- Section 7 (Method 2)
Query s250 Integer Recommended Frozen MID BRAIN/PONS- Section 9 (Method 2)
Query s240 Integer Recommended Frozen CEREBELLUM- Section 1 (Method 2)
Query s242 Integer Recommended Frozen CEREBELLUM- Section 3 (Method 2)
Query s244 Integer Recommended Frozen CEREBELLUM- Section 5 (Method 2)
Query s246 Integer Recommended Frozen CEREBELLUM- Section 7 (Method 2)
Query s248 Integer Recommended Frozen CEREBELLUM- Section 9 (Method 2)
Query s189 Integer Recommended Frozen MEDULLA- Whole Section 1
Query s190 Integer Recommended Frozen MEDULLA- Whole Section 3
Query s191 Integer Recommended Frozen MEDULLA- Whole Section 5
Query s187 Integer Recommended Frozen HALF BRAIN (uncut)- Left
Query s188 Integer Recommended Frozen HALF BRAIN (uncut)- Right
Query s166 Integer Recommended Frozen BRAIN- Whole
Query s196 Integer Recommended Frozen BRAIN- Dura
Query s197 Integer Recommended Frozen BRAIN- Cranial Nerve
Query s101 Integer Recommended Frozen BODY FLUIDS- Blood Plasma
Query s102 Integer Recommended Frozen BODY FLUIDS- RBC
Query s103 Integer Recommended Frozen BODY FLUIDS- CSF
Query s104 Integer Recommended Frozen BODY FLUIDS- Urine
Query s105 Integer Recommended Frozen BODY FLUIDS- Vitreous
Query s106 Integer Recommended Frozen CARDIOVASCULAR- Aorta
Query s107 Integer Recommended Frozen CARDIOVASCULAR- Artery
Query s108 Integer Recommended Frozen CARDIOVASCULAR- Heart
Query s109 Integer Recommended Frozen CARDIOVASCULAR- Vein
Query s110 Integer Recommended Frozen ENDOCRINE- Adrenal
Query s111 Integer Recommended Frozen ENDOCRINE- Breast
Query s112 Integer Recommended Frozen ENDOCRINE- Pineal
Query s113 Integer Recommended Frozen ENDOCRINE- Pituitary
Query s114 Integer Recommended Frozen ENDOCRINE- Thyroid
Query s115 Integer Recommended Frozen GASTROINTESTINAL- Anus
Query s116 Integer Recommended Frozen GASTROINTESTINAL- Appendix
Query s117 Integer Recommended Frozen GASTROINTESTINAL- Colon ascending
Query s118 Integer Recommended Frozen GASTROINTESTINAL- Colon descending
Query s119 Integer Recommended Frozen GASTROINTESTINAL- Duodenum
Query s120 Integer Recommended Frozen GASTROINTESTINAL- Esophagus
Query s121 Integer Recommended Frozen GASTROINTESTINAL- Gallbladder
Query s122 Integer Recommended Frozen GASTROINTESTINAL- Ileum
Query s123 Integer Recommended Frozen GASTROINTESTINAL- Jejunum
Query s124 Integer Recommended Frozen GASTROINTESTINAL- Liver
Query s125 Integer Recommended Frozen GASTROINTESTINAL- Pancreas
Query s126 Integer Recommended Frozen GASTROINTESTINAL- Stomach
Query s127 Integer Recommended Frozen GASTROINTESTINAL- Tongue
Query s128 Integer Recommended Frozen GENITAL- Fallopian Tube
Query s129 Integer Recommended Frozen GENITAL- Ovary
Query s130 Integer Recommended Frozen GENITAL- Testicle
Query s131 Integer Recommended Frozen GENITAL- Uterus
Query s132 Integer Recommended Frozen HEMATOPOIETIC- Lymph Node
Query s133 Integer Recommended Frozen HEMATOPOIETIC- Spleen
Query s134 Integer Recommended Frozen HEMATOPOIETIC- Thymus
Query s135 Integer Recommended Frozen HEMATOPOIETIC- Tonsil
Query s136 Integer Recommended Frozen INTEGUMENTARY- Adipose
Query s137 Integer Recommended Frozen INTEGUMENTARY- Hair
Query s138 Integer Recommended Frozen INTEGUMENTARY- Nail
Query s139 Integer Recommended Frozen INTEGUMENTARY- Skin
Query s140 Integer Recommended Frozen MUSCULO SKELETAL- Bone (rib)
Query s141 Integer Recommended Frozen MUSCULO SKELETAL- Diaphragm
Query s142 Integer Recommended Frozen MUSCULO SKELETAL- Long Bone
Query s143 Integer Recommended Frozen MUSCULO SKELETAL- Middle Ear
Query s144 Integer Recommended Frozen MUSCULO SKELETAL- Middle Ear Bone
Query s145 Integer Recommended Frozen MUSCULO SKELETAL- Psoas
Query s146 Integer Recommended Frozen RESPIRATORY- Bronchus
Query s147 Integer Recommended Frozen RESPIRATORY- Lung
Query s148 Integer Recommended Frozen RESPIRATORY- Trachea
Query s149 Integer Recommended Frozen SPINAL CORD- Cervical
Query s150 Integer Recommended Frozen SPINAL CORD- Lumbar
Query s151 Integer Recommended Frozen SPINAL CORD- Peripheral Nerve
Query s152 Integer Recommended Frozen SPINAL CORD- Thoracic
Query s153 Integer Recommended Frozen SPINAL CORD- Sacral
Query s154 Integer Recommended Frozen URINARY- Bladder
Query s155 Integer Recommended Frozen URINARY- Kidney
Query s156 Integer Recommended Frozen URINARY- Prostate
Query s157 Integer Recommended Frozen URINARY- Ureter
Query s158 Integer Recommended Frozen OTHER TISSUE- Eyes
Query s159 Integer Recommended Frozen OTHER TISSUE- Placenta
Query s160 Integer Recommended Frozen OTHER TISSUE- Umbilical Cord
Query s161 Integer Recommended Frozen OTHER TISSUE- Fibroblasts
Query s162 Integer Recommended Frozen OTHER TISSUE- Tumor
Query s163 Integer Recommended Frozen OTHER TISSUE- Brain subsections
Query s164 Integer Recommended Frozen OTHER TISSUE- Tissue(s) nrc
Query s165 Integer Recommended Frozen OTHER TISSUE- Astrocytes
Query s202 Integer Recommended Fixed CEREBRUM- HC Section 2 (Method 2)
Query s204 Integer Recommended Fixed CEREBRUM- HC Section 4 (Method 2)
Query s206 Integer Recommended Fixed CEREBRUM- HC Section 6 (Method 2)
Query s208 Integer Recommended Fixed CEREBRUM- HC Section 8 (Method 2)
Query s210 Integer Recommended Fixed CEREBRUM- HC Section 10 (Method 2)
Query s212 Integer Recommended Fixed CEREBRUM- HC Section 12 (Method 2)
Query s214 Integer Recommended Fixed CEREBRUM- HC Section 14 (Method 2)
Query s216 Integer Recommended Fixed CEREBRUM- HC Section 16 (Method 2)
Query s218 Integer Recommended Fixed CEREBRUM- HC Section 18 (Method 2)
Query s220 Integer Recommended Fixed CEREBRUM- HC Section 20 (Method 2)
Query s222 Integer Recommended Fixed CEREBRUM- HC Section 22 (Method 2)
Query s224 Integer Recommended Fixed CEREBRUM- HC Section 24 (Method 2)
Query s226 Integer Recommended Fixed CEREBRUM- HC Section 26 (Method 2)
Query s228 Integer Recommended Fixed CEREBRUM- HC Section 28 (Method 2)
Query s230 Integer Recommended Fixed CEREBRUM- HC Section 30 (Method 2)
Query s233 Integer Recommended Fixed MID BRAIN/PONS- Section 2 (Method 2)
Query s235 Integer Recommended Fixed MID BRAIN/PONS- Section 4 (Method 2)
Query s237 Integer Recommended Fixed MID BRAIN/PONS- Section 6 (Method 2)
Query s239 Integer Recommended Fixed MID BRAIN/PONS- Section 8 (Method 2)
Query s251 Integer Recommended Fixed MID BRAIN/PONS- Section 10 (Method 2)
Query s241 Integer Recommended Fixed CEREBELLUM- Section 2 (Method 2)
Query s243 Integer Recommended Fixed CEREBELLUM- Section 4 (Method 2)
Query s245 Integer Recommended Fixed CEREBELLUM- Section 6 (Method 2)
Query s247 Integer Recommended Fixed CEREBELLUM- Section 8 (Method 2)
Query s249 Integer Recommended Fixed CEREBELLUM- Section 10 (Method 2)
Query s89 Integer Recommended Fixed MEDULLA- Whole Section 2
Query s90 Integer Recommended Fixed MEDULLA- Whole Section 4
Query s87 Integer Recommended Fixed HALF BRAIN (uncut)- Left
Query s88 Integer Recommended Fixed HALF BRAIN (uncut)- Right
Query s66 Integer Recommended Fixed BRAIN- Whole
Query s96 Integer Recommended Fixed BRAIN- Dura
Query s97 Integer Recommended Fixed BRAIN- Cranial Nerve
Query s6 Integer Recommended Fixed CARDIOVASCULAR- Aorta
Query s7 Integer Recommended Fixed CARDIOVASCULAR- Artery
Query s8 Integer Recommended Fixed CARDIOVASCULAR- Heart
Query s9 Integer Recommended Fixed CARDIOVASCULAR- Vein
Query s10 Integer Recommended Fixed ENDOCRINE- Adrenal
Query s11 Integer Recommended Fixed ENDOCRINE- Breast
Query s12 Integer Recommended Fixed ENDOCRINE- Pineal
Query s13 Integer Recommended Fixed ENDOCRINE- Pituitary
Query s14 Integer Recommended Fixed ENDOCRINE- Thyroid
Query s15 Integer Recommended Fixed GASTROINTESTINAL- Anus
Query s16 Integer Recommended Fixed GASTROINTESTINAL- Appendix
Query s17 Integer Recommended Fixed GASTROINTESTINAL- Colon ascending
Query s18 Integer Recommended Fixed GASTROINTESTINAL- Colon descending
Query s19 Integer Recommended Fixed GASTROINTESTINAL- Duodenum
Query s20 Integer Recommended Fixed GASTROINTESTINAL- Esophagus
Query s21 Integer Recommended Fixed GASTROINTESTINAL- Gallbladder
Query s22 Integer Recommended Fixed GASTROINTESTINAL- Ileum
Query s23 Integer Recommended Fixed GASTROINTESTINAL- Jejunum
Query s24 Integer Recommended Fixed GASTROINTESTINAL- Liver
Query s25 Integer Recommended Fixed GASTROINTESTINAL- Pancreas
Query s26 Integer Recommended Fixed GASTROINTESTINAL- Stomach
Query s27 Integer Recommended Fixed GASTROINTESTINAL- Tongue
Query s28 Integer Recommended Fixed GENITAL- Fallopian Tube
Query s29 Integer Recommended Fixed GENITAL- Ovary
Query s30 Integer Recommended Fixed GENITAL- Testicle
Query s31 Integer Recommended Fixed GENITAL- Uterus
Query s32 Integer Recommended Fixed HEMATOPOIETIC- Lymph Node
Query s33 Integer Recommended Fixed HEMATOPOIETIC- Spleen
Query s34 Integer Recommended Fixed HEMATOPOIETIC- Thymus
Query s35 Integer Recommended Fixed HEMATOPOIETIC- Tonsil
Query s36 Integer Recommended Fixed INTEGUMENTARY- Adipose
Query s37 Integer Recommended Fixed INTEGUMENTARY- Hair
Query s38 Integer Recommended Fixed INTEGUMENTARY- Nail
Query s39 Integer Recommended Fixed INTEGUMENTARY- Skin
Query s40 Integer Recommended Fixed MUSCULO SKELETAL- Bone (rib)
Query s41 Integer Recommended Fixed MUSCULO SKELETAL- Diaphragm
Query s42 Integer Recommended Fixed MUSCULO SKELETAL- Long Bone
Query s43 Integer Recommended Fixed MUSCULO SKELETAL- Middle Ear
Query s44 Integer Recommended Fixed MUSCULO SKELETAL- Middle Ear Bone
Query s45 Integer Recommended Fixed MUSCULO SKELETAL- Psoas
Query s46 Integer Recommended Fixed RESPIRATORY- Bronchus
Query s47 Integer Recommended Fixed RESPIRATORY- Lung
Query s48 Integer Recommended Fixed RESPIRATORY- Trachea
Query s49 Integer Recommended Fixed SPINAL CORD- Cervical
Query s50 Integer Recommended Fixed SPINAL CORD- Lumbar
Query s51 Integer Recommended Fixed SPINAL CORD- Peripheral Nerve
Query s52 Integer Recommended Fixed SPINAL CORD- Thoracic
Query s53 Integer Recommended Fixed SPINAL CORD- Sacral
Query s54 Integer Recommended Fixed URINARY- Bladder
Query s55 Integer Recommended Fixed URINARY- Kidney
Query s56 Integer Recommended Fixed URINARY- Prostate
Query s57 Integer Recommended Fixed URINARY- Ureter
Query s58 Integer Recommended Fixed OTHER TISSUE- Eyes
Query s59 Integer Recommended Fixed OTHER TISSUE- Placenta
Query s60 Integer Recommended Fixed OTHER TISSUE- Umbilical Cord
Query s62 Integer Recommended Fixed OTHER TISSUE- Tumor
Query s64 Integer Recommended Fixed OTHER TISSUE- Tissue(s) nrc
Query brainzyn Integer Recommended Frozen Brain
Query brainxyn Integer Recommended Fixed Brain
Query cardzyn Integer Recommended Frozen Cardiovascular
Query endoczyn Integer Recommended Frozen Endocrine
Query gastrzyn Integer Recommended Frozen Gastrointestinal
Query genitzyn Integer Recommended Frozen Genital
Query hematzyn Integer Recommended Frozen Hematopoietic
Query integzyn Integer Recommended Frozen Integumentary
Query mskelzyn Integer Recommended Frozen Musculo-Skeletal
Query respzyn Integer Recommended Frozen Respiratory
Query scordzyn Integer Recommended Frozen Spinal Cord
Query urinzyn Integer Recommended Frozen Urinary
Query otherzyn Integer Recommended Frozen Other
Query systxyn Integer Recommended Fixed Systemic
mcomments String 225 Recommended More details of tissues available
frozentissue String 30 Recommended Is frozen tissue available?
fixedbrain String 30 Recommended Is fixed brain tissue available?
adi_r_score String 225 Recommended ADI-R score information
genename Integer Recommended Target gene of western blot 0::299; 999 0=AARS; 1=AATF; 2=ACTL6A; 3=ACTR5; 4=ACTR8; 5=ADARB1; 6=ADORA1; 7=AEBP2; 8=AKAP1; 9=AKAP10; 10=AKT1S1; 11=ALKBH5; 12=ANP32A; 13=ANXA6; 14=ARID4B; 15=ARL3; 16=ASH2L; 17=ATF1; 18=AUH; 19=BCCIP; 20=BDNF; 21=BHLHE40; 22=BUD31; 23=C16orf70; 24=C2orf47; 25=CACNB2; 26=CARM1; 27=CBX1; 28=CBX3; 29=CCAR2; 30=CD46; 31=CEBPG; 32=CELF1; 33=CHD3; 34=CIRBP; 35=CKAP4; 36=COL4A3BP; 37=COPS2; 38=COPS4; 39=COX5A; 40=CPPED1; 41=CPSF6; 42=CPSF7; 43=CREB; 44=CRH; 45=CRHBP; 46=CSNK1E; 47=CSTF2T; 48=CTBP1; 49=CTNNA1; 50=CTNNB1; 51=CTSK; 52=CUL1; 53=CUL3; 54=DACH2; 55=DAPK1; 56=DBP; 57=DBT; 58=DDB1; 59=DDX1; 60=DDX21; 61=DDX3X; 62=DDX5; 63=DEK; 64=DFNA5; 65=DLD; 66=DNAJC19; 67=DNMT3A; 68=DOC2A; 69=DRG2; 70=E2F; 71=EDF1; 72=EEF2; 73=EFTUD2; 74=EIF2S1; 75=EIF3A; 76=EIF3K; 77=EIF4A2; 78=EIF4A3; 79=ELAVL1; 80=ESAM; 81=ESF1; 82=EWSR1; 83=FOXP1; 84=GATAD2B; 85=GDPD3; 86=GFOD2; 87=GIGYF2; 88=GNAO1; 89=GNB2L1; 90=GNL3; 91=GPC6; 92=GPKOW; 93=GPR22; 94=GPS2; 95=GSK3B; 96=GTF2I; 97=H2AFX; 98=HAT1; 99=HDAC10; 100=HDAC3; 101=HDAC5; 102=HDAC6; 103=HDGF; 104=HIST1H1C; 105=HIST1H2AB; 106=HIST1H4; 107=HMG20A; 108=HMGB1; 109=HMGB2; 110=HNRNPA1; 111=HNRNPA2B1; 112=HNRNPC; 113=HNRNPF; 114=HNRNPH1; 115=HNRNPK; 116=HNRNPL; 117=HNRNPU; 118=HNRNPUL1; 119=HOMER1; 120=HOMER2; 121=HOMER3; 122=HP1BP3; 123=HSF1; 124=HSP90B1; 125=HSPD1; 126=HSPE1; 127=ILF2; 128=INPP5K; 129=KAT2A; 130=KAT2B; 131=KAT8; 132=KCNIP3; 133=KHDRBS1; 134=KLC1; 135=KRR1; 136=LARP1; 137=LCAT; 138=LDB1; 139=LIN7C; 140=LITAF; 141=LMNA; 142=MAD1L1; 143=MAGOH; 144=MAPK3; 145=MEAF; 146=MECP2; 147=MEF2; 148=MEF2C; 149=MEF2D; 150=MLH1; 151=MOBP; 152=MORF4L1; 153=MSI2; 154=MTA2; 155=MTA3; 156=MYT1; 157=NAE1; 158=NBN; 159=NCK2; 160=NCL; 161=NELFE; 162=NEUROD1; 163=NFE2L1; 164=NIPAL3; 165=NKRF; 166=NKX2-2; 167=NONO; 168=NPAS3; 169=NPM1; 170=NR1D2; 171=NR2C2; 172=NR3C1; 173=NR4A1; 174=NRCAM; 175=NTM; 176=NTRK2; 177=OLIG2; 178=OXSR1; 179=PALB2; 180=PARN; 181=PAX6; 182=PBX1; 183=PCBP1; 184=PCBP2; 185=PCCB; 186=PDPK1; 187=PER2; 188=PHB2; 189=PHC2; 190=PHF2; 191=PHF21A; 192=PHF6; 193=PIAS1; 194=PIK3CA; 195=PLEKHO1; 196=PPARG; 197=PPIL4; 198=PREB; 199=PRKAA2; 200=PRKAB1; 201=PRKAB2; 202=PRKAG1; 203=PRKAG2; 204=PRKAR1B; 205=PRPF8; 206=PRR5; 207=PSIP1; 208=PTPN1; 209=PUF60; 210=PYGO2; 211=RAPGEF4; 212=RAPGEF5; 213=RBBP4; 214=RBFOX2; 215=RBM17; 216=RBM22; 217=RBM26; 218=RBM39; 219=RCOR2; 220=REEP2; 221=RELA; 222=RFTN2; 223=RFX3; 224=RGS7; 225=RING1; 226=RPS5; 227=RPS6KA2; 228=RPS6KA3; 229=SAFB; 230=SAR1B; 231=SARNP; 232=SATB1; 233=SBDS; 234=SF3B4; 235=SIRT2; 236=SKIL; 237=SLTM; 238=SMAD2; 239=SMAD3; 240=SMARCB1; 241=SNX7; 242=SORBS2; 243=SPAST; 244=SREBF2; 245=SRR; 246=SRSF1; 247=SRSF7; 248=SRSF9; 249=SSRP1; 250=STAU1; 251=STXBP1; 252=SUCLG1; 253=SUGP2; 254=TAF7; 255=TAF9B; 256=TARDBP; 257=TAX1BP1; 258=TBL1XR1; 259=TBR1; 260=TBRG4; 261=TCF12; 262=TCF4; 263=TCF7L2; 264=TERF2; 265=TERF2IP; 266=TFAM; 267=THOC7; 268=THRAP3; 269=TIA1; 270=TMEM120B; 271=TRA2B; 272=TRIM23; 273=TRIM28; 274=TROVE2; 275=TUB; 276=UBE2K; 277=UBE2L3; 278=UTP3; 279=VAX2; 280=VPS53; 281=WDR45; 282=WDR55; 283=WWTR1; 284=XRCC5; 285=XRCC6; 286=YWHAE; 287=YWHAG; 288=ZBTB18; 289=ZBTB44; 290=ZC3H11A; 291=ZC3H15; 292=ZC3H4; 293=ZHX1; 294=ZHX2; 295=ZMAT2; 296=ZNF277; 297=ZNF385A; 298=ZNF622; 299=p-GSK3B; 999=missing
individualidrnaseqlibrarybid String 20 Recommended Identifying string linked to the individual or animal being studied individual_id_rnaseq_library_bid
mwacid String 20 Recommended MWAC ID
tissue_lysateconcent_mg_by_ml Float Recommended Concentration of lysate in tissue in mg/ml nanodrop_tissue_lysate_concentration_mg_by_ml
observed_mw Float Recommended Observed molecular weight
protein_tech_num String 20 Recommended Technology used for protein analysis
rppa_print_concentrationmgbyml Float Recommended Print concentration in mg/ml rppa_print_concentration_mg_by_ml
tissuestate01 Integer Recommended State of tissue preservation 0;1; 999 0=Flash frozen chunk; 1=Flash frozen chunk then isolated in trizol; 999=missing tissuestate
assay Integer Recommended The technology used to generate the data in this file 0::15; 999 0=ATACSeq; 1=CUT(and)Tag; 2=ChIPSeq; 3=GO-CaRT; 4=HI-C; 5=RNA-seq; 6=TMT quantitation; 7=bisulfiteSeq; 8=errBisulfiteSeq; 9=label free mass spectrometry; 10=methylationArray; 11=mirnaSeq; 12=oxBS-Seq; 13=scrnaSeq; 14=snpArray; 15=wholeGenomeSeq; 999=Missing
brain_bank String 20 Recommended Brain bank from which brain was obtained
calculated_mw String 20 Recommended Calculated molecular weight
file_name_antibody_on_synapse String 4,000 Recommended Filename for antibody
file_name_image_on_synapse String 4,000 Recommended Filename for image
filenameproteinexpresonsynapse String 20 Recommended Filename for protein expression file_name_protein_expression_on_synapse
file_namespotlayoutonsynapse String 20 Recommended Filename for spot layout file_name_spotlayout_on_synapse
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.

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