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Peds - Longitudinally Registered aMRI Variables

peds_mri_lr

02

Longitudinally registered anatomic MRI variables

Download Definition as
Download Submission Template as
Element NameData TypeSizeRequiredDescriptionValue RangeNotesAliases
subjectkeyGUIDRequiredThe NDAR Global Unique Identifier (GUID) for research subjectNDAR*
src_subject_idString20RequiredSubject ID how it's defined in lab/projectSubject_ID
lr_timepoint_labelString5RequiredUser-defined timepoint/visit label - a label selected by the site at the time of registration of a new timepoint into the database. This label is used to group all the instruments administered to a subject at a given timepoint
age_days_date_of_visit_to_dobIntegerRequiredAge in days at Visit (DoV-DoB), same as age of scan if obtained
lr_brainstem_volumeString255RecommendedMRI Variables: Brainstem Volume (Longitudinally Registered) (mm3)
lr_caudate_left_volumeString255RecommendedMRI Variables: Caudate Left Volume (Longitudinally Registered) (mm3)
lr_caudate_right_volumeString255RecommendedMRI Variables: Caudate Right Volume (Longitudinally Registered) (mm3)
lr_cerebellum_left_volumeString255RecommendedMRI Variables: Cerebellum Left Volume (Longitudinally Registered) (mm3)
lr_cerebellum_right_volumeString255RecommendedMRI Variables: Cerebellum Right Volume (Longitudinally Registered) (mm3)
lr_civet_gray_surface_leftFileRecommendedMRI Variables: CIVET output for gray surface left (Longitudinally Registered)
lr_civet_gray_surface_rightFileRecommendedMRI Variables: CIVET output for gray surface right (Longitudinally Registered)
lr_civet_gray_surf_rsl_leftFileRecommendedMRI Variables: CIVET output for gray surface resampled (surface registered) left (Longitudinally Registered)LR_civet_gray_surface_rsl_left
lr_civet_gray_surf_rsl_rightFileRecommendedMRI Variables: CIVET output for gray surface resampled (surface registered) right (Longitudinally Registered)LR_civet_gray_surface_rsl_right
lr_civet_gyrification_idx_ltFileRecommendedMRI Variables: CIVET output for gyrification index left (Longitudinally Registered)LR_civet_gyrification_index_left
lr_civet_gyrification_idx_rtFileRecommendedMRI Variables: CIVET output for gyrification index right (Longitudinally Registered)LR_civet_gyrification_index_right
lr_civet_lobe_tlink_20mm_leftFileRecommendedMRI Variables: CIVET output for lobe thickness tlink 20mm left (Longitudinally Registered)LR_civet_lobe_thickness_tlink_20mm_left
lr_civet_lobe_tlink_20mm_rgtFileRecommendedMRI Variables: CIVET output for lobe thickness tlink 20mm right (Longitudinally Registered)LR_civet_lobe_thickness_tlink_20mm_right
lr_civet_mc_gray_leftFileRecommendedMRI Variables: CIVET output for mean curvature gray left (Longitudinally Registered)
lr_civet_mc_gray_rightFileRecommendedMRI Variables: CIVET output for mean curvature gray right (Longitudinally Registered)
lr_civet_mc_mid_leftFileRecommendedMRI Variables: CIVET output for mean curvature mid left (Longitudinally Registered)
lr_civet_mc_mid_rightFileRecommendedMRI Variables: CIVET output for mean curvature mid right (Longitudinally Registered)
lr_civet_mc_rsl_gray_leftFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) gray left (Longitudinally Registered)
lr_civet_mc_rsl_gray_rightFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) gray right (Longitudinally Registered)
lr_civet_mc_rsl_mid_leftFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) mid left (Longitudinally Registered)
lr_civet_mc_rsl_mid_rightFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) mid right (Longitudinally Registered)
lr_civet_mc_rsl_white_leftFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) white left (Longitudinally Registered)
lr_civet_mc_rsl_white_rightFileRecommendedMRI Variables: CIVET output for mean curvature resampled (surface registered) white right (Longitudinally Registered)
lr_civet_mc_white_leftFileRecommendedMRI Variables: CIVET output for mean curvature white left (Longitudinally Registered)
lr_civet_mc_white_rightFileRecommendedMRI Variables: CIVET output for mean curvature white right (Longitudinally Registered)
lr_civet_mid_surface_leftFileRecommendedMRI Variables: CIVET output for mid surface left (Longitudinally Registered)
lr_civet_mid_surface_rightFileRecommendedMRI Variables: CIVET output for mid surface right (Longitudinally Registered)
lr_civet_mid_surface_rsl_leftFileRecommendedMRI Variables: CIVET output for mid surface resampled (surface registered) left (Longitudinally Registered)
lr_civet_mid_surface_rsl_rightFileRecommendedMRI Variables: CIVET output for mid surface resampled (surface registered) right (Longitudinally Registered)
lr_civet_thickness_leftFileRecommendedMRI Variables: CIVET output for thickness left (Longitudinally Registered)
lr_civet_thickness_rightFileRecommendedMRI Variables: CIVET output for thickness right (Longitudinally Registered)
lr_civet_thickness_rsl_leftFileRecommendedMRI Variables: CIVET output for thickness resampled (surface registered) left (Longitudinally Registered)
lr_civet_thickness_rsl_rightFileRecommendedMRI Variables: CIVET output for thickness resampled (surface registered) right (Longitudinally Registered)
lr_civet_white_surface_leftFileRecommendedMRI Variables: CIVET output for white surface left (Longitudinally Registered)
lr_civet_white_surf_left_calFileRecommendedMRI Variables: CIVET output for white surface left calibrated (Longitudinally Registered)LR_civet_white_surface_left_calibrated
lr_civet_white_surface_rightFileRecommendedMRI Variables: CIVET output for white surface right (Longitudinally Registered)
lr_civet_white_surf_right_calFileRecommendedMRI Variables: CIVET output for white surface right calibrated (Longitudinally Registered)LR_civet_white_surface_right_calibrated
lr_clp_pdw_file_mncFileRecommendedMRI Variables: Native proton density weighted MINC file (Longitudinally Registered)LR_clp_pdw
lr_clp_pdw_file_niiFileRecommendedMRI Variables: Native proton density weighted NII file (Longitudinally Registered)
lr_clp_t1w_file_mncFileRecommendedMRI Variables: Native T1 weighted MINC file (Longitudinally Registered)LR_clp_t1w
lr_clp_t1w_file_niiFileRecommendedMRI Variables: Native T1 weighted NII file (Longitudinally Registered)
lr_clp_t2w_file_mncFileRecommendedMRI Variables: Native T2 weighted MINC file (Longitudinally Registered)LR_clp_t2w
lr_clp_t2w_file_niiFileRecommendedMRI Variables: Native T2 weighted NII file (Longitudinally Registered)
lr_csf_volumeString255RecommendedMRI Variables: CSF Volume (Longitudinally Registered) (mm3)
lr_extracerebral_csf_volumeString255RecommendedMRI Variables: Extracerebral CSF Volume (Longitudinally Registered) (mm3)
lr_frontal_left_grey_matterString255RecommendedMRI Variables: Frontal Left Grey Matter (Longitudinally Registered) (mm3)
lr_frontal_left_volumeString255RecommendedMRI Variables: Frontal Left Volume (Longitudinally Registered) (mm3)
lr_frontal_left_white_matterString255RecommendedMRI Variables: Frontal Left White Matter (Longitudinally Registered) (mm3)
lr_frontal_right_grey_matterString255RecommendedMRI Variables: Frontal Right Grey Matter (Longitudinally Registered) (mm3)
lr_frontal_right_volumeString255RecommendedMRI Variables: Frontal Right Volume (Longitudinally Registered) (mm3)
lr_frontal_right_white_matterString255RecommendedMRI Variables: Frontal Right White Matter (Longitudinally Registered) (mm3)
lr_globus_pallidus_left_volString255RecommendedMRI Variables: Globus Pallidus Left Volume (Longitudinally Registered) (mm3)LR_Globus_Pallidus_Left_Volume
lr_globus_pallidus_right_volString255RecommendedMRI Variables: Globus Pallidus Right Volume (Longitudinally Registered) (mm3)LR_Globus_Pallidus_Right_Volume
lr_grey_matter_volumeString255RecommendedMRI Variables: Grey Matter Volume (Longitudinally Registered) (mm3)
lr_gyrification_idx_gray_leftString255RecommendedMRI Variables: Gyrification Index of Gray Left Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_gray_left
lr_gyrification_idx_gray_rgtString255RecommendedMRI Variables: Gyrification Index of Gray Right Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_gray_right
lr_gyrification_idx_mid_leftString255RecommendedMRI Variables: Gyrification Index of Mid Left Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_mid_left
lr_gyrification_idx_mid_rightString255RecommendedMRI Variables: Gyrification Index of Mid Right Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_mid_right
lr_gyrification_idx_white_ltString255RecommendedMRI Variables: Gyrification Index of White Left Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_white_lef, LR_gyrification_index_white_left
lr_gyrification_idx_white_rgtString255RecommendedMRI Variables: Gyrification Index of White Right Lobe (Longitudinally Registered) (mm3)LR_gyrification_index_white_right
lr_intracranial_volumeString255RecommendedMRI Variables: Intracranial Volume (Longitudinally Registered) (mm3)
lr_jacobian_file_mncFileRecommendedMRI Variables: The jacobian determinant MINC file(Longitudinally Registered)LR_jacobian
lr_jacobian_file_niiFileRecommendedMRI Variables: The jacobian determinant NII file(Longitudinally Registered)
lr_lateral_ventricle_left_volString255RecommendedMRI Variables: Lateral Ventricle Left Volume (Longitudinally Registered) (mm3)LR_Lateral_Ventricle_Left_Volume
lr_lateral_ventricle_right_volString255RecommendedMRI Variables: Lateral Ventricle Right Volume (LongitudinallyRegistered) (mm3)LR_Lateral_Ventricle_Right_Volume
lr_nl_logjacobian_rsl_file_mncFileRecommendedMRI Variables: non-linear jacobian resampled MINC file(Longitudinally Registered)LR_longitudinal_nl_logjacobian_resampled
lr_nl_logjacobian_rsl_file_niiFileRecommendedMRI Variables: non-linear jacobian resampled NII file(Longitudinally Registered)
lr_modulated_csf_file_mncFileRecommendedMRI Variables: Modulated CSF volumes MINC file(Longitudinally Registered)LR_modulated_csf
lr_modulated_csf_file_niiFileRecommendedMRI Variables: Modulated CSF volumes NII file(Longitudinally Registered)
lr_modulated_gm_file_mncFileRecommendedMRI Variables: Modulated grey matter volumes MINC file(Longitudinally Registered)LR_modulated_gm
lr_modulated_gm_file_niiFileRecommendedMRI Variables: Modulated grey matter volumes NII file(Longitudinally Registered)
lr_modulated_wm_file_mncFileRecommendedMRI Variables: Modulated white matter volumes MINC file(Longitudinally Registered)LR_modulated_wm
lr_modulated_wm_file_niiFileRecommendedMRI Variables: Modulated white matter volumes NII file(Longitudinally Registered)
lr_nlr_grid_file_mncFileRecommendedMRI Variables: MINC file(Longitudinally Registered)LR_nlr_grid
lr_nlr_grid_file_niiFileRecommendedMRI Variables: NII file(Longitudinally Registered)
lr_nlr_xfmFileRecommendedMRI Variables: Non-linearly registered transformation matrix (Longitudinally Registered)
lr_occipital_left_grey_matterString255RecommendedMRI Variables: Occipital Left Grey Matter (Longitudinally Registered) (mm3)
lr_occipital_left_volumeString255RecommendedMRI Variables: Occipital Left Volume (Longitudinally Registered) (mm3)
lr_occipital_lt_white_matterString255RecommendedMRI Variables: Occipital Left White Matter (Longitudinally Registered) (mm3)LR_Occipital_Left_White_Matter
lr_occipital_right_grey_matterString255RecommendedMRI Variables: Occipital Right Grey Matter (Longitudinally Registered) (mm3)
lr_occipital_right_volumeString255RecommendedMRI Variables: Occipital Right Volume (Longitudinally Registered) (mm3)
lr_occipital_rt_white_matterString255RecommendedMRI Variables: Occipital Right White Matter (Longitudinally Registered) (mm3)LR_Occipital_Right_White_Matter
lr_parenchyma_volString255RecommendedMRI Variables: Parenchyma Volume (Longitudinally Registered) (mm3)
lr_parietal_left_grey_matterString255RecommendedMRI Variables: Parietal Left Grey Matter (Longitudinally Registered) (mm3)
lr_parietal_left_volumeString255RecommendedMRI Variables: Parietal Left Volume (Longitudinally Registered) (mm3)
lr_parietal_left_white_matterString255RecommendedMRI Variables: Parietal Left White Matter (Longitudinally Registered) (mm3)
lr_parietal_right_grey_matterString255RecommendedMRI Variables: Parietal Right Grey Matter (Longitudinally Registered) (mm3)
lr_parietal_right_volumeString255RecommendedMRI Variables: Parietal Right Volume (Longitudinally Registered) (mm3)
lr_parietal_right_white_matterString255RecommendedMRI Variables: Parietal Right White Matter (Longitudinally Registered) (mm3)
lr_putamen_left_volumeString255RecommendedMRI Variables: Putamen Left Volume (Longitudinally Registered) (mm3)
lr_putamen_right_volumeString255RecommendedMRI Variables: Putamen Right Volume (Longitudinally Registered) (mm3)
lr_tal_pdw_file_mncFileRecommendedMRI Variables: Stereotaxic PDW MINC file (Longitudinally Registered)LR_tal_mnc_pdw
lr_tal_pdw_file_niiFileRecommendedMRI Variables: Stereotaxic PDW NII file (Longitudinally Registered)
lr_tal_t1w_file_mncFileRecommendedMRI Variables: Stereotaxic T1w MINC file (Longitudinally Registered)LR_tal_mnc_t1w
lr_tal_t1w_file_niiFileRecommendedMRI Variables: Stereotaxic T1w NII file (Longitudinally Registered)
lr_tal_t2w_file_mncFileRecommendedMRI Variables: Stereotaxic T2w MINC file (Longitudinally Registered)LR_tal_mnc_t2w
lr_tal_t2w_file_niiFileRecommendedMRI Variables: Stereotaxic T2w NII file (Longitudinally Registered)
lr_tal_noscale_pdw_file_mncFileRecommendedMRI Variables: Stereotaxic noscale pdw MINC file (Longitudinally Registered)LR_tal_noscale_mnc_pdw
lr_tal_noscale_pdw_file_niiFileRecommendedMRI Variables: Stereotaxic noscale pdw NII file (Longitudinally Registered)
lr_tal_noscale_t1w_file_mncFileRecommendedMRI Variables: Stereotaxic noscale t1w MINC file (Longitudinally Registered)LR_tal_noscale_mnc_t1w
lr_tal_noscale_t1w_file_niiFileRecommendedMRI Variables: Stereotaxic noscale t1w NII file (Longitudinally Registered)
lr_tal_noscale_t2w_file_mncFileRecommendedMRI Variables: Stereotaxic noscale t2w MINC file (Longitudinally Registered)LR_tal_noscale_mnc_t2w
lr_tal_noscale_t2w_file_niiFileRecommendedMRI Variables: Stereotaxic noscale t2w NII file (Longitudinally Registered)
lr_tal_noscale_xfm_t1wFileRecommendedMRI Variables: Stereotaxic noscale t1w transformation matrix (Longitudinally Registered)
lr_tal_noscale_xfm_t2wFileRecommendedMRI Variables: Stereotaxic noscale t2w transformation matrix (Longitudinally Registered)
lr_tal_xfm_t1wFileRecommendedMRI Variables: Stereotaxic t1w transformation matrix (Longitudinally Registered)
lr_tal_xfm_t2wFileRecommendedMRI Variables: Stereotaxic t2w transformation matrix (Longitudinally Registered)
lr_temporal_left_grey_matterString255RecommendedMRI Variables: Temporal Left Grey Matter (Longitudinally Registered) (mm3)
lr_temporal_left_volumeString255RecommendedMRI Variables: Temporal Left Volume (Longitudinally Registered) (mm3)
lr_temporal_left_white_matterString255RecommendedMRI Variables: Temporal Left White Matter (Longitudinally Registered) (mm3)
lr_temporal_right_grey_matterString255RecommendedMRI Variables: Temporal Right Grey Matter (Longitudinally Registered) (mm3)
lr_temporal_right_volumeString255RecommendedMRI Variables: Temporal Right Volume (Longitudinally Registered) (mm3)
lr_temporal_rt_white_matterString255RecommendedMRI Variables: Temporal Right White Matter (Longitudinally Registered) (mm3)LR_Temporal_Right_White_Matter
lr_thalamus_left_volumeString255RecommendedMRI Variables: Thalamus Left Volume (Longitudinally Registered) (mm3)
lr_thalamus_right_volumeString255RecommendedMRI Variables: Thalamus Right Volume (LongitudinallyRegistered) (mm3)
lr_white_matter_volumeString255RecommendedMRI Variables: White Matter Volume (Longitudinally Registered) (mm3)
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
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  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
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Distribution for DataStructure: peds_mri_lr02 and Element:
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