|
subjectkey |
GUID |
|
Required |
The NDAR Global Unique Identifier (GUID) for research subject |
NDAR*
|
|
pseudoguid |
|
src_subject_id |
String |
20
|
Required |
Subject ID how it's defined in lab/project |
|
|
SHOWUMBN, brainid |
|
interview_age |
Integer |
|
Required |
Age in months at the time of the interview/test/sampling/imaging. |
0::1440
|
Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month.
|
agedeath |
|
interview_date |
Date |
|
Required |
Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY |
|
|
|
|
sex |
String |
20
|
Required |
Sex of subject at birth |
M;F; O; NR
|
M = Male; F = Female; O=Other; NR = Not reported
|
gender, sex |
Query
|
race |
String |
30
|
Recommended |
Race of study subject |
American Indian/Alaska Native; Asian; Hawaiian or Pacific Islander; Black or African American; White; More than one race; Unknown or not reported; Other Non-White; Other
|
|
|
|
ethnic_group |
String |
255
|
Recommended |
Ethnic group |
|
|
|
|
grade_highed |
String |
50
|
Recommended |
Grade/Highest education |
|
1= Less than 6th grade; 2= Some high school; 3= High school diploma or GED; 4= Some college, no degree; 5= Associates degree; 6= Bachelors degree; 7= Some graduate school; 8= Masters degree and above; 9= Some post-graduate training, no degree; 10= Completed 8th grade, no high school; 11= High school; 12= College or University; 13= Graduate school; 14= Other; 15= Less than high school; 99= Information not available
|
education |
|
disorder |
String |
50
|
Recommended |
Disorder |
|
|
primarydx |
|
cdeathoff |
String |
50
|
Recommended |
Cause of Death |
|
|
|
Query
|
death027 |
Integer |
|
Recommended |
Manner of death |
1::9; -888; -999
|
1=Natural; 2=Homicide; 3=Accident; 4=Pending investigation; 5=Suicide; 6=Could not be determined; 8=Not Collected; 9=Not Documented; -888=Not Applicable; -999=Missing
|
|
Query
|
pminterval |
Integer |
|
Recommended |
Post mortem interval in hours |
|
-9 = Missing
|
pmi |
Query
|
ph |
Float |
|
Recommended |
tissue pH |
|
-9 = Missing
|
|
|
sample_id_original |
String |
100
|
Recommended |
Original, user-defined Sample ID |
|
|
|
|
celltype |
String |
50
|
Recommended |
Cell type |
|
|
|
|
br_reg |
String |
50
|
Recommended |
Brain region |
|
|
|
Query
|
rindlpfc |
Float |
|
Recommended |
RIN number for DLPFC |
|
|
|
Query
|
agedays |
Integer |
|
Recommended |
Age in months |
|
|
|
Query
|
bmi |
Float |
|
Recommended |
body mass index of subject |
|
-9 = Missing
|
|
|
historyrec |
String |
4,000
|
Recommended |
Brief Medical History |
|
|
|
Query
|
surgoraut |
String |
20
|
Recommended |
surgery or autopsy |
|
|
|
Query
|
ageyears |
Integer |
|
Recommended |
Age in years |
|
|
|
|
adi_r |
String |
10
|
Recommended |
Is ADI-R information available? |
|
|
|
|
hbsag |
String |
25
|
Recommended |
hepatitis B surface antigen test results HBsAg |
|
|
|
|
hiv |
String |
25
|
Recommended |
HIV test results |
|
|
|
Query
|
mravail |
Integer |
|
Recommended |
medical records available |
|
|
|
Query
|
npavail |
Integer |
|
Recommended |
neuropathology report available |
|
|
|
Query
|
adiravail |
Integer |
|
Recommended |
ADI-R available |
|
|
|
Query
|
rincortex |
Float |
|
Recommended |
RIN number for cortex |
|
|
|
Query
|
rincbell |
Float |
|
Recommended |
RIN number for cerebellum |
|
|
|
Query
|
s201 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 1 (Method 2) |
|
|
|
Query
|
s203 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 3 (Method 2) |
|
|
|
Query
|
s205 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 5 (Method 2) |
|
|
|
Query
|
s207 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 7 (Method 2) |
|
|
|
Query
|
s209 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 9 (Method 2) |
|
|
|
Query
|
s211 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 11 (Method 2) |
|
|
|
Query
|
s213 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 13 (Method 2) |
|
|
|
Query
|
s215 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 15 (Method 2) |
|
|
|
Query
|
s217 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 17 (Method 2) |
|
|
|
Query
|
s219 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 19 (Method 2) |
|
|
|
Query
|
s221 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 21 (Method 2) |
|
|
|
Query
|
s223 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 23 (Method 2) |
|
|
|
Query
|
s225 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 25 (Method 2) |
|
|
|
Query
|
s227 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 27 (Method 2) |
|
|
|
Query
|
s229 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 29 (Method 2) |
|
|
|
Query
|
s231 |
Integer |
|
Recommended |
Frozen CEREBRUM- HC Section 31 (Method 2) |
|
|
|
Query
|
s232 |
Integer |
|
Recommended |
Frozen MID BRAIN/PONS- Section 1 (Method 2) |
|
|
|
Query
|
s234 |
Integer |
|
Recommended |
Frozen MID BRAIN/PONS- Section 3 (Method 2) |
|
|
|
Query
|
s236 |
Integer |
|
Recommended |
Frozen MID BRAIN/PONS- Section 5 (Method 2) |
|
|
|
Query
|
s238 |
Integer |
|
Recommended |
Frozen MID BRAIN/PONS- Section 7 (Method 2) |
|
|
|
Query
|
s250 |
Integer |
|
Recommended |
Frozen MID BRAIN/PONS- Section 9 (Method 2) |
|
|
|
Query
|
s240 |
Integer |
|
Recommended |
Frozen CEREBELLUM- Section 1 (Method 2) |
|
|
|
Query
|
s242 |
Integer |
|
Recommended |
Frozen CEREBELLUM- Section 3 (Method 2) |
|
|
|
Query
|
s244 |
Integer |
|
Recommended |
Frozen CEREBELLUM- Section 5 (Method 2) |
|
|
|
Query
|
s246 |
Integer |
|
Recommended |
Frozen CEREBELLUM- Section 7 (Method 2) |
|
|
|
Query
|
s248 |
Integer |
|
Recommended |
Frozen CEREBELLUM- Section 9 (Method 2) |
|
|
|
Query
|
s189 |
Integer |
|
Recommended |
Frozen MEDULLA- Whole Section 1 |
|
|
|
Query
|
s190 |
Integer |
|
Recommended |
Frozen MEDULLA- Whole Section 3 |
|
|
|
Query
|
s191 |
Integer |
|
Recommended |
Frozen MEDULLA- Whole Section 5 |
|
|
|
Query
|
s187 |
Integer |
|
Recommended |
Frozen HALF BRAIN (uncut)- Left |
|
|
|
Query
|
s188 |
Integer |
|
Recommended |
Frozen HALF BRAIN (uncut)- Right |
|
|
|
Query
|
s166 |
Integer |
|
Recommended |
Frozen BRAIN- Whole |
|
|
|
Query
|
s196 |
Integer |
|
Recommended |
Frozen BRAIN- Dura |
|
|
|
Query
|
s197 |
Integer |
|
Recommended |
Frozen BRAIN- Cranial Nerve |
|
|
|
Query
|
s101 |
Integer |
|
Recommended |
Frozen BODY FLUIDS- Blood Plasma |
|
|
|
Query
|
s102 |
Integer |
|
Recommended |
Frozen BODY FLUIDS- RBC |
|
|
|
Query
|
s103 |
Integer |
|
Recommended |
Frozen BODY FLUIDS- CSF |
|
|
|
Query
|
s104 |
Integer |
|
Recommended |
Frozen BODY FLUIDS- Urine |
|
|
|
Query
|
s105 |
Integer |
|
Recommended |
Frozen BODY FLUIDS- Vitreous |
|
|
|
Query
|
s106 |
Integer |
|
Recommended |
Frozen CARDIOVASCULAR- Aorta |
|
|
|
Query
|
s107 |
Integer |
|
Recommended |
Frozen CARDIOVASCULAR- Artery |
|
|
|
Query
|
s108 |
Integer |
|
Recommended |
Frozen CARDIOVASCULAR- Heart |
|
|
|
Query
|
s109 |
Integer |
|
Recommended |
Frozen CARDIOVASCULAR- Vein |
|
|
|
Query
|
s110 |
Integer |
|
Recommended |
Frozen ENDOCRINE- Adrenal |
|
|
|
Query
|
s111 |
Integer |
|
Recommended |
Frozen ENDOCRINE- Breast |
|
|
|
Query
|
s112 |
Integer |
|
Recommended |
Frozen ENDOCRINE- Pineal |
|
|
|
Query
|
s113 |
Integer |
|
Recommended |
Frozen ENDOCRINE- Pituitary |
|
|
|
Query
|
s114 |
Integer |
|
Recommended |
Frozen ENDOCRINE- Thyroid |
|
|
|
Query
|
s115 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Anus |
|
|
|
Query
|
s116 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Appendix |
|
|
|
Query
|
s117 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Colon ascending |
|
|
|
Query
|
s118 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Colon descending |
|
|
|
Query
|
s119 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Duodenum |
|
|
|
Query
|
s120 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Esophagus |
|
|
|
Query
|
s121 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Gallbladder |
|
|
|
Query
|
s122 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Ileum |
|
|
|
Query
|
s123 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Jejunum |
|
|
|
Query
|
s124 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Liver |
|
|
|
Query
|
s125 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Pancreas |
|
|
|
Query
|
s126 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Stomach |
|
|
|
Query
|
s127 |
Integer |
|
Recommended |
Frozen GASTROINTESTINAL- Tongue |
|
|
|
Query
|
s128 |
Integer |
|
Recommended |
Frozen GENITAL- Fallopian Tube |
|
|
|
Query
|
s129 |
Integer |
|
Recommended |
Frozen GENITAL- Ovary |
|
|
|
Query
|
s130 |
Integer |
|
Recommended |
Frozen GENITAL- Testicle |
|
|
|
Query
|
s131 |
Integer |
|
Recommended |
Frozen GENITAL- Uterus |
|
|
|
Query
|
s132 |
Integer |
|
Recommended |
Frozen HEMATOPOIETIC- Lymph Node |
|
|
|
Query
|
s133 |
Integer |
|
Recommended |
Frozen HEMATOPOIETIC- Spleen |
|
|
|
Query
|
s134 |
Integer |
|
Recommended |
Frozen HEMATOPOIETIC- Thymus |
|
|
|
Query
|
s135 |
Integer |
|
Recommended |
Frozen HEMATOPOIETIC- Tonsil |
|
|
|
Query
|
s136 |
Integer |
|
Recommended |
Frozen INTEGUMENTARY- Adipose |
|
|
|
Query
|
s137 |
Integer |
|
Recommended |
Frozen INTEGUMENTARY- Hair |
|
|
|
Query
|
s138 |
Integer |
|
Recommended |
Frozen INTEGUMENTARY- Nail |
|
|
|
Query
|
s139 |
Integer |
|
Recommended |
Frozen INTEGUMENTARY- Skin |
|
|
|
Query
|
s140 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Bone (rib) |
|
|
|
Query
|
s141 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Diaphragm |
|
|
|
Query
|
s142 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Long Bone |
|
|
|
Query
|
s143 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Middle Ear |
|
|
|
Query
|
s144 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Middle Ear Bone |
|
|
|
Query
|
s145 |
Integer |
|
Recommended |
Frozen MUSCULO SKELETAL- Psoas |
|
|
|
Query
|
s146 |
Integer |
|
Recommended |
Frozen RESPIRATORY- Bronchus |
|
|
|
Query
|
s147 |
Integer |
|
Recommended |
Frozen RESPIRATORY- Lung |
|
|
|
Query
|
s148 |
Integer |
|
Recommended |
Frozen RESPIRATORY- Trachea |
|
|
|
Query
|
s149 |
Integer |
|
Recommended |
Frozen SPINAL CORD- Cervical |
|
|
|
Query
|
s150 |
Integer |
|
Recommended |
Frozen SPINAL CORD- Lumbar |
|
|
|
Query
|
s151 |
Integer |
|
Recommended |
Frozen SPINAL CORD- Peripheral Nerve |
|
|
|
Query
|
s152 |
Integer |
|
Recommended |
Frozen SPINAL CORD- Thoracic |
|
|
|
Query
|
s153 |
Integer |
|
Recommended |
Frozen SPINAL CORD- Sacral |
|
|
|
Query
|
s154 |
Integer |
|
Recommended |
Frozen URINARY- Bladder |
|
|
|
Query
|
s155 |
Integer |
|
Recommended |
Frozen URINARY- Kidney |
|
|
|
Query
|
s156 |
Integer |
|
Recommended |
Frozen URINARY- Prostate |
|
|
|
Query
|
s157 |
Integer |
|
Recommended |
Frozen URINARY- Ureter |
|
|
|
Query
|
s158 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Eyes |
|
|
|
Query
|
s159 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Placenta |
|
|
|
Query
|
s160 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Umbilical Cord |
|
|
|
Query
|
s161 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Fibroblasts |
|
|
|
Query
|
s162 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Tumor |
|
|
|
Query
|
s163 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Brain subsections |
|
|
|
Query
|
s164 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Tissue(s) nrc |
|
|
|
Query
|
s165 |
Integer |
|
Recommended |
Frozen OTHER TISSUE- Astrocytes |
|
|
|
Query
|
s202 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 2 (Method 2) |
|
|
|
Query
|
s204 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 4 (Method 2) |
|
|
|
Query
|
s206 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 6 (Method 2) |
|
|
|
Query
|
s208 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 8 (Method 2) |
|
|
|
Query
|
s210 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 10 (Method 2) |
|
|
|
Query
|
s212 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 12 (Method 2) |
|
|
|
Query
|
s214 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 14 (Method 2) |
|
|
|
Query
|
s216 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 16 (Method 2) |
|
|
|
Query
|
s218 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 18 (Method 2) |
|
|
|
Query
|
s220 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 20 (Method 2) |
|
|
|
Query
|
s222 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 22 (Method 2) |
|
|
|
Query
|
s224 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 24 (Method 2) |
|
|
|
Query
|
s226 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 26 (Method 2) |
|
|
|
Query
|
s228 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 28 (Method 2) |
|
|
|
Query
|
s230 |
Integer |
|
Recommended |
Fixed CEREBRUM- HC Section 30 (Method 2) |
|
|
|
Query
|
s233 |
Integer |
|
Recommended |
Fixed MID BRAIN/PONS- Section 2 (Method 2) |
|
|
|
Query
|
s235 |
Integer |
|
Recommended |
Fixed MID BRAIN/PONS- Section 4 (Method 2) |
|
|
|
Query
|
s237 |
Integer |
|
Recommended |
Fixed MID BRAIN/PONS- Section 6 (Method 2) |
|
|
|
Query
|
s239 |
Integer |
|
Recommended |
Fixed MID BRAIN/PONS- Section 8 (Method 2) |
|
|
|
Query
|
s251 |
Integer |
|
Recommended |
Fixed MID BRAIN/PONS- Section 10 (Method 2) |
|
|
|
Query
|
s241 |
Integer |
|
Recommended |
Fixed CEREBELLUM- Section 2 (Method 2) |
|
|
|
Query
|
s243 |
Integer |
|
Recommended |
Fixed CEREBELLUM- Section 4 (Method 2) |
|
|
|
Query
|
s245 |
Integer |
|
Recommended |
Fixed CEREBELLUM- Section 6 (Method 2) |
|
|
|
Query
|
s247 |
Integer |
|
Recommended |
Fixed CEREBELLUM- Section 8 (Method 2) |
|
|
|
Query
|
s249 |
Integer |
|
Recommended |
Fixed CEREBELLUM- Section 10 (Method 2) |
|
|
|
Query
|
s89 |
Integer |
|
Recommended |
Fixed MEDULLA- Whole Section 2 |
|
|
|
Query
|
s90 |
Integer |
|
Recommended |
Fixed MEDULLA- Whole Section 4 |
|
|
|
Query
|
s87 |
Integer |
|
Recommended |
Fixed HALF BRAIN (uncut)- Left |
|
|
|
Query
|
s88 |
Integer |
|
Recommended |
Fixed HALF BRAIN (uncut)- Right |
|
|
|
Query
|
s66 |
Integer |
|
Recommended |
Fixed BRAIN- Whole |
|
|
|
Query
|
s96 |
Integer |
|
Recommended |
Fixed BRAIN- Dura |
|
|
|
Query
|
s97 |
Integer |
|
Recommended |
Fixed BRAIN- Cranial Nerve |
|
|
|
Query
|
s6 |
Integer |
|
Recommended |
Fixed CARDIOVASCULAR- Aorta |
|
|
|
Query
|
s7 |
Integer |
|
Recommended |
Fixed CARDIOVASCULAR- Artery |
|
|
|
Query
|
s8 |
Integer |
|
Recommended |
Fixed CARDIOVASCULAR- Heart |
|
|
|
Query
|
s9 |
Integer |
|
Recommended |
Fixed CARDIOVASCULAR- Vein |
|
|
|
Query
|
s10 |
Integer |
|
Recommended |
Fixed ENDOCRINE- Adrenal |
|
|
|
Query
|
s11 |
Integer |
|
Recommended |
Fixed ENDOCRINE- Breast |
|
|
|
Query
|
s12 |
Integer |
|
Recommended |
Fixed ENDOCRINE- Pineal |
|
|
|
Query
|
s13 |
Integer |
|
Recommended |
Fixed ENDOCRINE- Pituitary |
|
|
|
Query
|
s14 |
Integer |
|
Recommended |
Fixed ENDOCRINE- Thyroid |
|
|
|
Query
|
s15 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Anus |
|
|
|
Query
|
s16 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Appendix |
|
|
|
Query
|
s17 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Colon ascending |
|
|
|
Query
|
s18 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Colon descending |
|
|
|
Query
|
s19 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Duodenum |
|
|
|
Query
|
s20 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Esophagus |
|
|
|
Query
|
s21 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Gallbladder |
|
|
|
Query
|
s22 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Ileum |
|
|
|
Query
|
s23 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Jejunum |
|
|
|
Query
|
s24 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Liver |
|
|
|
Query
|
s25 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Pancreas |
|
|
|
Query
|
s26 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Stomach |
|
|
|
Query
|
s27 |
Integer |
|
Recommended |
Fixed GASTROINTESTINAL- Tongue |
|
|
|
Query
|
s28 |
Integer |
|
Recommended |
Fixed GENITAL- Fallopian Tube |
|
|
|
Query
|
s29 |
Integer |
|
Recommended |
Fixed GENITAL- Ovary |
|
|
|
Query
|
s30 |
Integer |
|
Recommended |
Fixed GENITAL- Testicle |
|
|
|
Query
|
s31 |
Integer |
|
Recommended |
Fixed GENITAL- Uterus |
|
|
|
Query
|
s32 |
Integer |
|
Recommended |
Fixed HEMATOPOIETIC- Lymph Node |
|
|
|
Query
|
s33 |
Integer |
|
Recommended |
Fixed HEMATOPOIETIC- Spleen |
|
|
|
Query
|
s34 |
Integer |
|
Recommended |
Fixed HEMATOPOIETIC- Thymus |
|
|
|
Query
|
s35 |
Integer |
|
Recommended |
Fixed HEMATOPOIETIC- Tonsil |
|
|
|
Query
|
s36 |
Integer |
|
Recommended |
Fixed INTEGUMENTARY- Adipose |
|
|
|
Query
|
s37 |
Integer |
|
Recommended |
Fixed INTEGUMENTARY- Hair |
|
|
|
Query
|
s38 |
Integer |
|
Recommended |
Fixed INTEGUMENTARY- Nail |
|
|
|
Query
|
s39 |
Integer |
|
Recommended |
Fixed INTEGUMENTARY- Skin |
|
|
|
Query
|
s40 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Bone (rib) |
|
|
|
Query
|
s41 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Diaphragm |
|
|
|
Query
|
s42 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Long Bone |
|
|
|
Query
|
s43 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Middle Ear |
|
|
|
Query
|
s44 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Middle Ear Bone |
|
|
|
Query
|
s45 |
Integer |
|
Recommended |
Fixed MUSCULO SKELETAL- Psoas |
|
|
|
Query
|
s46 |
Integer |
|
Recommended |
Fixed RESPIRATORY- Bronchus |
|
|
|
Query
|
s47 |
Integer |
|
Recommended |
Fixed RESPIRATORY- Lung |
|
|
|
Query
|
s48 |
Integer |
|
Recommended |
Fixed RESPIRATORY- Trachea |
|
|
|
Query
|
s49 |
Integer |
|
Recommended |
Fixed SPINAL CORD- Cervical |
|
|
|
Query
|
s50 |
Integer |
|
Recommended |
Fixed SPINAL CORD- Lumbar |
|
|
|
Query
|
s51 |
Integer |
|
Recommended |
Fixed SPINAL CORD- Peripheral Nerve |
|
|
|
Query
|
s52 |
Integer |
|
Recommended |
Fixed SPINAL CORD- Thoracic |
|
|
|
Query
|
s53 |
Integer |
|
Recommended |
Fixed SPINAL CORD- Sacral |
|
|
|
Query
|
s54 |
Integer |
|
Recommended |
Fixed URINARY- Bladder |
|
|
|
Query
|
s55 |
Integer |
|
Recommended |
Fixed URINARY- Kidney |
|
|
|
Query
|
s56 |
Integer |
|
Recommended |
Fixed URINARY- Prostate |
|
|
|
Query
|
s57 |
Integer |
|
Recommended |
Fixed URINARY- Ureter |
|
|
|
Query
|
s58 |
Integer |
|
Recommended |
Fixed OTHER TISSUE- Eyes |
|
|
|
Query
|
s59 |
Integer |
|
Recommended |
Fixed OTHER TISSUE- Placenta |
|
|
|
Query
|
s60 |
Integer |
|
Recommended |
Fixed OTHER TISSUE- Umbilical Cord |
|
|
|
Query
|
s62 |
Integer |
|
Recommended |
Fixed OTHER TISSUE- Tumor |
|
|
|
Query
|
s64 |
Integer |
|
Recommended |
Fixed OTHER TISSUE- Tissue(s) nrc |
|
|
|
Query
|
brainzyn |
Integer |
|
Recommended |
Frozen Brain |
|
|
|
Query
|
brainxyn |
Integer |
|
Recommended |
Fixed Brain |
|
|
|
Query
|
cardzyn |
Integer |
|
Recommended |
Frozen Cardiovascular |
|
|
|
Query
|
endoczyn |
Integer |
|
Recommended |
Frozen Endocrine |
|
|
|
Query
|
gastrzyn |
Integer |
|
Recommended |
Frozen Gastrointestinal |
|
|
|
Query
|
genitzyn |
Integer |
|
Recommended |
Frozen Genital |
|
|
|
Query
|
hematzyn |
Integer |
|
Recommended |
Frozen Hematopoietic |
|
|
|
Query
|
integzyn |
Integer |
|
Recommended |
Frozen Integumentary |
|
|
|
Query
|
mskelzyn |
Integer |
|
Recommended |
Frozen Musculo-Skeletal |
|
|
|
Query
|
respzyn |
Integer |
|
Recommended |
Frozen Respiratory |
|
|
|
Query
|
scordzyn |
Integer |
|
Recommended |
Frozen Spinal Cord |
|
|
|
Query
|
urinzyn |
Integer |
|
Recommended |
Frozen Urinary |
|
|
|
Query
|
otherzyn |
Integer |
|
Recommended |
Frozen Other |
|
|
|
Query
|
systxyn |
Integer |
|
Recommended |
Fixed Systemic |
|
|
|
|
mcomments |
String |
225
|
Recommended |
More details of tissues available |
|
|
|
|
frozentissue |
String |
30
|
Recommended |
Is frozen tissue available? |
|
|
|
|
fixedbrain |
String |
30
|
Recommended |
Is fixed brain tissue available? |
|
|
|
|
adi_r_score |
String |
225
|
Recommended |
ADI-R score information |
|
|
|
|
genename |
Integer |
|
Recommended |
Target gene of western blot |
0::299; 999
|
0=AARS; 1=AATF; 2=ACTL6A; 3=ACTR5; 4=ACTR8; 5=ADARB1; 6=ADORA1; 7=AEBP2; 8=AKAP1; 9=AKAP10; 10=AKT1S1; 11=ALKBH5; 12=ANP32A; 13=ANXA6; 14=ARID4B; 15=ARL3; 16=ASH2L; 17=ATF1; 18=AUH; 19=BCCIP; 20=BDNF; 21=BHLHE40; 22=BUD31; 23=C16orf70; 24=C2orf47; 25=CACNB2; 26=CARM1; 27=CBX1; 28=CBX3; 29=CCAR2; 30=CD46; 31=CEBPG; 32=CELF1; 33=CHD3; 34=CIRBP; 35=CKAP4; 36=COL4A3BP; 37=COPS2; 38=COPS4; 39=COX5A; 40=CPPED1; 41=CPSF6; 42=CPSF7; 43=CREB; 44=CRH; 45=CRHBP; 46=CSNK1E; 47=CSTF2T; 48=CTBP1; 49=CTNNA1; 50=CTNNB1; 51=CTSK; 52=CUL1; 53=CUL3; 54=DACH2; 55=DAPK1; 56=DBP; 57=DBT; 58=DDB1; 59=DDX1; 60=DDX21; 61=DDX3X; 62=DDX5; 63=DEK; 64=DFNA5; 65=DLD; 66=DNAJC19; 67=DNMT3A; 68=DOC2A; 69=DRG2; 70=E2F; 71=EDF1; 72=EEF2; 73=EFTUD2; 74=EIF2S1; 75=EIF3A; 76=EIF3K; 77=EIF4A2; 78=EIF4A3; 79=ELAVL1; 80=ESAM; 81=ESF1; 82=EWSR1; 83=FOXP1; 84=GATAD2B; 85=GDPD3; 86=GFOD2; 87=GIGYF2; 88=GNAO1; 89=GNB2L1; 90=GNL3; 91=GPC6; 92=GPKOW; 93=GPR22; 94=GPS2; 95=GSK3B; 96=GTF2I; 97=H2AFX; 98=HAT1; 99=HDAC10; 100=HDAC3; 101=HDAC5; 102=HDAC6; 103=HDGF; 104=HIST1H1C; 105=HIST1H2AB; 106=HIST1H4; 107=HMG20A; 108=HMGB1; 109=HMGB2; 110=HNRNPA1; 111=HNRNPA2B1; 112=HNRNPC; 113=HNRNPF; 114=HNRNPH1; 115=HNRNPK; 116=HNRNPL; 117=HNRNPU; 118=HNRNPUL1; 119=HOMER1; 120=HOMER2; 121=HOMER3; 122=HP1BP3; 123=HSF1; 124=HSP90B1; 125=HSPD1; 126=HSPE1; 127=ILF2; 128=INPP5K; 129=KAT2A; 130=KAT2B; 131=KAT8; 132=KCNIP3; 133=KHDRBS1; 134=KLC1; 135=KRR1; 136=LARP1; 137=LCAT; 138=LDB1; 139=LIN7C; 140=LITAF; 141=LMNA; 142=MAD1L1; 143=MAGOH; 144=MAPK3; 145=MEAF; 146=MECP2; 147=MEF2; 148=MEF2C; 149=MEF2D; 150=MLH1; 151=MOBP; 152=MORF4L1; 153=MSI2; 154=MTA2; 155=MTA3; 156=MYT1; 157=NAE1; 158=NBN; 159=NCK2; 160=NCL; 161=NELFE; 162=NEUROD1; 163=NFE2L1; 164=NIPAL3; 165=NKRF; 166=NKX2-2; 167=NONO; 168=NPAS3; 169=NPM1; 170=NR1D2; 171=NR2C2; 172=NR3C1; 173=NR4A1; 174=NRCAM; 175=NTM; 176=NTRK2; 177=OLIG2; 178=OXSR1; 179=PALB2; 180=PARN; 181=PAX6; 182=PBX1; 183=PCBP1; 184=PCBP2; 185=PCCB; 186=PDPK1; 187=PER2; 188=PHB2; 189=PHC2; 190=PHF2; 191=PHF21A; 192=PHF6; 193=PIAS1; 194=PIK3CA; 195=PLEKHO1; 196=PPARG; 197=PPIL4; 198=PREB; 199=PRKAA2; 200=PRKAB1; 201=PRKAB2; 202=PRKAG1; 203=PRKAG2; 204=PRKAR1B; 205=PRPF8; 206=PRR5; 207=PSIP1; 208=PTPN1; 209=PUF60; 210=PYGO2; 211=RAPGEF4; 212=RAPGEF5; 213=RBBP4; 214=RBFOX2; 215=RBM17; 216=RBM22; 217=RBM26; 218=RBM39; 219=RCOR2; 220=REEP2; 221=RELA; 222=RFTN2; 223=RFX3; 224=RGS7; 225=RING1; 226=RPS5; 227=RPS6KA2; 228=RPS6KA3; 229=SAFB; 230=SAR1B; 231=SARNP; 232=SATB1; 233=SBDS; 234=SF3B4; 235=SIRT2; 236=SKIL; 237=SLTM; 238=SMAD2; 239=SMAD3; 240=SMARCB1; 241=SNX7; 242=SORBS2; 243=SPAST; 244=SREBF2; 245=SRR; 246=SRSF1; 247=SRSF7; 248=SRSF9; 249=SSRP1; 250=STAU1; 251=STXBP1; 252=SUCLG1; 253=SUGP2; 254=TAF7; 255=TAF9B; 256=TARDBP; 257=TAX1BP1; 258=TBL1XR1; 259=TBR1; 260=TBRG4; 261=TCF12; 262=TCF4; 263=TCF7L2; 264=TERF2; 265=TERF2IP; 266=TFAM; 267=THOC7; 268=THRAP3; 269=TIA1; 270=TMEM120B; 271=TRA2B; 272=TRIM23; 273=TRIM28; 274=TROVE2; 275=TUB; 276=UBE2K; 277=UBE2L3; 278=UTP3; 279=VAX2; 280=VPS53; 281=WDR45; 282=WDR55; 283=WWTR1; 284=XRCC5; 285=XRCC6; 286=YWHAE; 287=YWHAG; 288=ZBTB18; 289=ZBTB44; 290=ZC3H11A; 291=ZC3H15; 292=ZC3H4; 293=ZHX1; 294=ZHX2; 295=ZMAT2; 296=ZNF277; 297=ZNF385A; 298=ZNF622; 299=p-GSK3B; 999=missing
|
|
|
individualidrnaseqlibrarybid |
String |
20
|
Recommended |
Identifying string linked to the individual or animal being studied |
|
|
individual_id_rnaseq_library_bid |
|
mwacid |
String |
20
|
Recommended |
MWAC ID |
|
|
|
|
tissue_lysateconcent_mg_by_ml |
Float |
|
Recommended |
Concentration of lysate in tissue in mg/ml |
|
|
nanodrop_tissue_lysate_concentration_mg_by_ml |
|
observed_mw |
Float |
|
Recommended |
Observed molecular weight |
|
|
|
|
protein_tech_num |
String |
20
|
Recommended |
Technology used for protein analysis |
|
|
|
|
rppa_print_concentrationmgbyml |
Float |
|
Recommended |
Print concentration in mg/ml |
|
|
rppa_print_concentration_mg_by_ml |
|
tissuestate01 |
Integer |
|
Recommended |
State of tissue preservation |
0;1; 999
|
0=Flash frozen chunk; 1=Flash frozen chunk then isolated in trizol; 999=missing
|
tissuestate |
|
assay |
Integer |
|
Recommended |
The technology used to generate the data in this file |
0::15; 999
|
0=ATACSeq; 1=CUT(and)Tag; 2=ChIPSeq; 3=GO-CaRT; 4=HI-C; 5=RNA-seq; 6=TMT quantitation; 7=bisulfiteSeq; 8=errBisulfiteSeq; 9=label free mass spectrometry; 10=methylationArray; 11=mirnaSeq; 12=oxBS-Seq; 13=scrnaSeq; 14=snpArray; 15=wholeGenomeSeq; 999=Missing
|
|
|
brain_bank |
String |
20
|
Recommended |
Brain bank from which brain was obtained |
|
|
|
|
calculated_mw |
String |
20
|
Recommended |
Calculated molecular weight |
|
|
|
|
file_name_antibody_on_synapse |
String |
4,000
|
Recommended |
Filename for antibody |
|
|
|
|
file_name_image_on_synapse |
String |
4,000
|
Recommended |
Filename for image |
|
|
|
|
filenameproteinexpresonsynapse |
String |
20
|
Recommended |
Filename for protein expression |
|
|
file_name_protein_expression_on_synapse |
|
file_namespotlayoutonsynapse |
String |
20
|
Recommended |
Filename for spot layout |
|
|
file_name_spotlayout_on_synapse |