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This is a U.S. Government computer system, which may be accessed and used only for authorized Government business by authorized personnel. Unauthorized access or use of this computer system may subject violators to criminal, civil, and/or administrative action. All information on this computer system may be intercepted, recorded, read, copied, and disclosed by and to authorized personnel for official purposes, including criminal investigations. Such information includes sensitive data encrypted to comply with confidentiality and privacy requirements. Access or use of this computer system by any person, whether authorized or unauthorized, constitutes consent to these terms. There is no right of privacy in this system.

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NIMH Data Archive
NDA ABCD CCF OAI NIAAADA AMP SCZ HEAL

ATP Brain Donor MRI

63 Shared Subjects

MRI images of Autism Tissue Program brain donors. The file is in the NDAR ATP Image01 format.
Federated
MRI
12/08/2010
atp_donor_mri01
12/14/2022
View Change History
01
Definition
Submission Template
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR*
image_file File Required Data file (image, behavioral, anatomical, etc)
src_subject_id String 20 Required Subject ID how it's defined in lab/project
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0::1440 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month.
Query image_modality String 20 Required Image modality MRI; PET; CT; SPECT; ultrasound; FA; X-Ray; spectroscopy; microscopy; DEXA; fNIRS Computed Radiography; Computed Tomography; External Camera Photography; FA; General Microscopy; MRI; Magnetic Resonance; Magnetic Resonance Spectroscopy; Nuclear Medicine; Single Photon Emission Computed Tomography; Ultrasound
Query image_orientation String 20 Required Orientation Axial; Coronal; Sagittal !=DICOM means not equal DICOM
Query image_unit4 String 50 Required Units [4] Inches; Centimeters; Angstroms; Nanometers; Micrometers; Millimeters; Meters; Kilometers; Miles; Nanoseconds; Microseconds; Milliseconds; Seconds; Minutes; Hours; Hertz; Diffusion gradient; frame number; number of Volumes (across time)
Query image_unit3 String 20 Required Units [3] Z dimension Inches; Centimeters; Angstroms; Nanometers; Micrometers; Millimeters; Meters; Kilometers; Miles; Nanoseconds; Microseconds; Milliseconds; Seconds; Minutes; Hours; Hertz; frame number
Query image_unit2 String 20 Required Units [2] Y dimension Inches; Centimeters; Angstroms; Nanometers; Micrometers; Millimeters; Meters; Kilometers; Miles; Nanoseconds; Microseconds; Milliseconds; Seconds; Minutes; Hours; Hertz; frame number
Query image_unit1 String 20 Required Units [1] X dimension Inches; Centimeters; Angstroms; Nanometers; Micrometers; Millimeters; Meters; Kilometers; Miles; Nanoseconds; Microseconds; Milliseconds; Seconds; Minutes; Hours; Hertz; frame number !=DICOM means not equal DICOM
image_history String 1,024 Required Image history,f.e. transformations steps and other modifications.
Query image_description String 512 Required Image description, i.e. DTI, fMRI, Fast SPGR, phantom, EEG, dynamic PET
archive_file_location String 255 Required SFTP location of archive file
comments_misc String 4,000 Recommended Miscellaneous comments on study, interview, methodology relevant to this form data
Query image_extent5 Integer Required Extent [5] 1+
Query image_extent4 Integer Required Extent [4]
Query image_extent3 Integer Required Extent [3] Z dimension 1+
Query image_extent2 Integer Required Extent [2] Y dimension 1+
Query image_extent1 Integer Required Extent [1] X dimension 1+ !=DICOM means not equal DICOM
Query image_num_dimensions Integer Required Number of dimensions 1 :: 5 !=DICOM means not equal DICOM
image_thumbnail_file Thumbnail Required Thumbnail
Query image_slice_thickness Float Required Slice thickness !=DICOM means not equal DICOM
Query image_resolution5 Float Required Resolution [5]
Query image_resolution4 Float Required Resolution [4]
Query image_resolution3 Float Required Resolution [3] Z dimension
Query image_resolution2 Float Required Resolution [2] Y dimension
Query image_resolution1 Float Required Resolution [1] X dimension !=DICOM means not equal DICOM
date_updated Date Required Date record updated
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY
date_created Date Required Date, when experiment was created
sex String 20 Required Sex of subject at birth M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported gender
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.

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