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Imaging Work Flow

1,235 Shared Subjects

N/A
Neurosignal Recordings
Summary
06/11/2015
iwf01
06/15/2015
View Change History
01
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR*
src_subject_id String 20 Required Subject ID how it's defined in lab/project
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY scandate
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0::1440 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month.
sex String 20 Required Sex of subject at birth M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported gender
Query directcreated Integer Recommended Directories created 0;1 0=No; 1=Yes
examiner String 3 Recommended Examiner rater_exam
Query dfr_beh1 Integer Recommended DFR 1: Behavioral data collected? 0;1 0=No; 1=Yes
Query dfr_phyco1 Integer Recommended DFR 1: Physiological data collected? 0;1 0=No; 1=Yes
dfr_phymis1 String 50 Recommended DFR 1: Physiological data missing
Query dfr_upload1 Integer Recommended DFR 1: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query dfr_preprocom1 Integer Recommended DFR 1: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query dfr_beh2 Integer Recommended DFR 2: Behavioral data collected? 0;1 0=No; 1=Yes
Query dfr_phyco2 Integer Recommended DFR 2: Physiological data collected? 0;1 0=No; 1=Yes
dfr_phymis2 String 50 Recommended DFR 2: Physiological data missing
Query dfr_upload2 Integer Recommended DFR 2: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query dfr_preprocom2 Integer Recommended DFR 2: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query dfr_beh3 Integer Recommended DFR 3: Behavioral data collected? 0;1 0=No; 1=Yes
Query dfr_phyco3 Integer Recommended DFR 3: Physiological data collected? 0;1 0=No; 1=Yes
dfr_phymis3 String 50 Recommended DFR 3: Physiological data missing
Query dfr_upload3 Integer Recommended DFR 3: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query dfr_preprocom3 Integer Recommended DFR 3: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query dfr_beh4 Integer Recommended DFR 4: Behavioral data collected? 0;1 0=No; 1=Yes
Query dfr_phyco4 Integer Recommended DFR 4: Physiological data collected? 0;1 0=No; 1=Yes
dfr_phymis4 String 50 Recommended DFR 4: Physiological data missing
Query dfr_upload4 Integer Recommended DFR 4: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query dfr_preprocom4 Integer Recommended DFR 4: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query ffa_beh Integer Recommended FFA: Behavioral data collected? 0;1 0=No; 1=Yes
Query ffa_phyco Integer Recommended FFA: Physiological data collected? 0;1 0=No; 1=Yes
ffa_phymis String 50 Recommended FFA: Physiological data missing
Query ffa_upload Integer Recommended FFA: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query ffa_preprocom Integer Recommended FFA: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query rs_beh Integer Recommended RS: Behavioral data collected? 0;1 0=No; 1=Yes
rs_phymis String 50 Recommended RS: Physiological data missing
Query rs_upload Integer Recommended RS: Scans, physiological and behavioral data uploaded to server 0;1 0=No; 1=Yes
Query rs_preprocom Integer Recommended RS: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query cmr_upload Integer Recommended CMR: Scans data uploaded to server 0;1 0=No; 1=Yes
Query cmr_preprocom Integer Recommended CMR: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query dti_upload Integer Recommended DTI: Scans data uploaded to server 0;1 0=No; 1=Yes
Query dti_preprocom Integer Recommended DTI: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query gre_upload Integer Recommended GRE: Scans data uploaded to server 0;1 0=No; 1=Yes
Query gre_preprocom Integer Recommended GRE: Preprocessing complete 1;2 1=Complete; 2=Unfinished
Query gre_epi Integer Recommended GRE: Correction applied to EPI 0;1 0=No; 1=Yes
Query mpr_upload Integer Recommended MPR: Scans data uploaded to server 0;1 0=No; 1=Yes
Query mpr_preprocom Integer Recommended MPR: Structural analysis complete (freesurfer pipeline) 1;2 1=Complete; 2=Unfinished
Query qc_epi_lost Integer Recommended EPI signal lost investigated 0;1 0=No; 1=Yes
Query qc_epi_lostsignal Integer Recommended EPI signal lost? 0::3 0=No; 1=Large; 2=Medium; 3=Normal
qc_epi_comment String 100 Recommended Comment (Provide phase encoding axis angle if possible)
Query qc_epi_move Integer Recommended Movements curves inspected? 0;1 0=No; 1=Yes
Query qc_epi_spikes Integer Recommended Spikes inspected? 0;1 0=No; 1=Yes
Query qc_epi_seqflag Integer Recommended EPI: Sequences to flag 1::6 1=DFR Run 1; 2=DFR Run 2; 3=DFR Run 3; 4=DFR Run 4; Resting State; 6=Localizer FFA
Query qc_epi_phy Integer Recommended EPI: Physiological data inspected 0;1 0=No; 1=Yes
Query qc_epi_phyflag Integer Recommended EPI: Physiological data to flag 1::6 1=DFR Run 1; 2=DFR Run 2; 3=DFR Run 3; 4=DFR Run 4; Resting State; 6=Localizer FFA
Query qc_epi_mor Integer Recommended EPI: Normalization inspected 0;1 0=No; 1=Yes
Query da_func_software Integer Recommended Data analysis: Software used 0;1 0=FSL; 1=SPM
Query da_func_cdm Integer Recommended Data analysis: Covariates and Design Matrix created? 0;1 0=No; 1=Yes
Query da_func_fv Integer Recommended Data analysis: First level data analysis complete? 0;1 0=No; 1=Yes
Query da_func_betas Integer Recommended Data analysis: Betas serie data analysis complete? 0;1 0=No; 1=Yes
Query da_func_civi Integer Recommended Data analysis: Contrasts of interest visually inspected? 0;1 0=No; 1=Yes
Query da_dti Integer Recommended Data analysis: DTI analysis complete 1;2 1=Complete; 2=Unfinished
Query da_rs Integer Recommended Data analysis: Resting state analysis complete 1;2 1=Complete; 2=Unfinished
da_comment String 100 Recommended Data analysis: comment
Query con_grpana Integer Recommended Subject to include in groupo analysis? 0;1 0=No; 1=Yes
wf_comment String 100 Recommended Conclusion: comments and flags
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

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