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Filter Cart

The Filter Cart provides a way to query and access data for which you may be interested.  There are multiple places to go query and Add to Filter Cart (Sometimes called Download).  

A few points related to the filter cart are important to understand with the NDA Query/Filter implementation: 

First, the filter cart is populated asyncronously.  So, when you add subjects, sometimes it may take a few minutes to populate.  You can continue to do other things during this time. 

When you are adding your first filter, all data associated with your query will be added to the filter cart (whether it be a collection, a concept, a study, a data structure/elment or subjects). Not all data available for the subjects selected will necessarily be displayed.  For example, if you select the NDA imaging structure image03, and further restrict that query to scan_type fMRI, only fMRI images will appear and only the image03 structure will be available.  However, if you want to see all of the clinical and phenotype, then select, "Find All Subject Data" to see all the data avaialble for those subjects.  

when a secord or third filter is applied, an AND condition is used to determine the subjects that are exist in all filters.  If the subject does not appear in any filter, that subjects data will be excluded from your filter cart. Given the sparcity of data in the NDA, it is possible for no subjects to appear across filters.  If that happens, clear your filter cart, and start over.  

The NDA is looking to enhance query/filtering.  Until additional tools become available, it is best to package more data than you need and then package and download the data and use other tools to further restrict and analyze the data.  If you have any questions on data access, are interested in using avaialble web services or need help accessing data, please contact us for assistance.  

Frequently Asked Questions

Glossary

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NDAR provides a single access to de-identified autism research data. For permission to download data, you will need an NDAR account with approved access to NDAR or a connected repository (AGRE, IAN, or the ATP). For NDAR access, you need to be a research investigator sponsored by an NIH recognized institution with federal wide assurance. See Request Access for more information.

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The filters you have selected from various query interfaces will be stored here, in the 'Filter Cart'. The database will be queried using filters added to your 'Filter Cart', when multiple filters are defined, each will be executed using 'AND' logic, so with each filter that is applied the result set gets smaller.

From the 'Filter Cart' you can inspect each of the filters that have been defined, and you also have the option to remove filters. The 'Filter Cart' itself will display the number of filters applied along with the number of subjects that are identified by the combination of those filters. For example a GUID filter with two subjects, followed by a GUID filter for just one of those subjects would return only data for the subject that is in both GUID filters.

If you have a question about the filter cart, or underlying filters please contact the help desk at The NDA Help Desk

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1 Numbers reported are subjects by age
New Trial
New Project

Format should be in the following format: Activity Code, Institute Abbreviation, and Serial Number. Grant Type, Support Year, and Suffix should be excluded. For example, grant 1R01MH123456-01A1 should be entered R01MH123456

Please select an experiment type below

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SelectExperiment IdExperiment NameExperiment Type
  • Select One
  • EEG
  • EGG
  • Eye Tracking
  • Omics
  • fMRI
Created On
953Shallow EpisodicfMRI06/20/2018
952Semantic EncodingfMRI06/20/2018
951Resting StatefMRI06/20/2018
950NBACKfMRI06/20/2018
949Resting StatefMRI06/18/2018
943Emotional Face TaskfMRI06/13/2018
941Meridians localizerfMRI06/07/2018
940V1 localizer movingDotsfMRI06/07/2018
939movingDotsfMRI06/07/2018
938MT localizer dots movingDotsfMRI06/07/2018
937MT localizer gratings movingDotsfMRI06/07/2018
936V1 localizer peripheryfMRI06/07/2018
935Contrast peripheryfMRI06/07/2018
934MT localizer peripheryfMRI06/07/2018
933Pilot01: Posner Cueing with st-tACSEye Tracking06/06/2018
932Social- Theory of Mind Localizer TaskfMRI06/01/2018
931Faces TaskfMRI05/31/2018
930Go_NogofMRI05/30/2018
929Moral RatingfMRI05/30/2018
928Pain Detection fMRI05/30/2018
927Reward TaskfMRI05/30/2018
926Go no Go TaskfMRI05/30/2018
924EARLI Placenta WGBSOmics05/24/2018
923Anxiety-CBT fMRI (pre-post) - Version 4 BlockfMRI05/15/2018
922Anxiety-CBT fMRI (pre-post) - Version 3 BlockfMRI05/15/2018
921Anxiety-CBT fMRI (pre-post) - Version 2 BlockfMRI05/15/2018
920Anxiety-CBT fMRI (pre-post) - Version 1 BlockfMRI05/15/2018
919Neural overlap in item representations across episodes impairs context memoryfMRI05/11/2018
918ReferenceTissue: U01MH106892_Brain_Amplicon_SeqOmics05/08/2018
917Virginia_single_cell_HiSeq3000Omics05/03/2018
916Virginia_single_cell_HiSeq2500Omics05/03/2018
915Virginia_single_cell_MiSeqOmics05/03/2018
914PFC analysis in bloodOmics04/27/2018
913Task and emotional content driven visual competitionfMRI04/27/2018
912Task and emotional content driven visual competitionEEG04/23/2018
911Resting StatefMRI04/20/2018
910Modified Monetary Incentive Delay fMRI04/20/2018
908Resting State Pre-Stress Visit 1fMRI04/20/2018
907Montreal Imaging Stress Task Visit 1fMRI04/18/2018
9062-back Post-Stress Visit 1fMRI04/18/2018
9051-back Post-Stress Visit 1fMRI04/18/2018
9040-back Post-Stress Visit 1fMRI04/18/2018
9032-back Pre-Stress Visit 1fMRI04/18/2018
9021-back Pre-Stress Visit 1fMRI04/18/2018
9010-back Pre-Stress Visit 1fMRI04/18/2018
900DTIfMRI04/11/2018
899Investigating a Neurobehavioral Mechanism of Paranoia - Resting State ScansfMRI04/06/2018
898FAST-POMAfMRI04/03/2018
897parvizi_eeg_109EEG03/19/2018
896parvizi_eeg_107EEG03/19/2018
Collection - Add Experiment
Add Supporting Documentation
Select File

Please enter the name of the data structure to search or if your definition does not exist, please upload that definition so that it can be appropriately defined for submission. Multiple data structures may be associated with a single Data Expected entry. Please add only one data structure per assessment.

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You have requested to move the sharing dates for the following assessments:
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Shared

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

General

Title, investigators, and Collection Description may be edited along with the Collection Phase. For Collection Phase, the options Pre-enrollment, Enrollment, and Completed can be chosen allowing the Collection Owner to indicate the stage of data collection.

Funding Source

The ability to associate the funding source for the project is provided. For NIH funded grants, linkage to Project Reporter information (e.g. R01MH123456) is supported. Projects funded by others, including the URL of the project, are listed. Non NIH funded projects will become available here to link that data with the appropriate funding agency.

Supporting Documentation

Any documents related to the project may be uploaded clarifying the data or acquisition methods used may be uploaded and made available here. The default is to share these documents to the general public. An option to share only to qualified Researchers is also an option.

Clinical Trials

For clinical trials, the option to link to the clinical trial in clinicaltrials.gov is optionally provided.

Collection Summary Collection Charts
Collection Title Collection Investigators Collection Description
Dysfunction of Sensory Inhibition in Autism
Richard Edden 
Autism Spectrum Disorder (ASD) is a group of developmental disorders which affects approximately 1% of children, a prevalence rate that is increasing annually. The molecular basis of ASD is likely to be complex and heterogeneous, but given the central role of the inhibitory neurotransmitter GABA incognitive control, development and plasticity and a growing body of evidence linking GABAergicdys function to autism and autistic phenotypes, GABA system is a strong potential area for ASD research.Recently, it has become possible to measure GABA concentration non-invasively in the brain using magnetic resonance spectroscopy (MRS), and in an extremely novel set of experiments we have shown that differences in regional GABA concentration among healthy subjects have measurable behavioral correlates. For example, GABA concentration in sensorimotor cortex correlates with performance at a somotosensory discrimination task (see paper attached and below); this may have particular relevance for autism, as atypical response to tactile stimuli is a common (and diagnostic) feature of autism and one that can substantially impair behavioral function This proposal arises from a collaboration between Dr Richard Edden (PI) and Dr Stewart Mostofsky (Co-I)to apply the extremely novel pairing of MRS of GABA with somatosensory paradigms to investigate whether there is a measurable GABA deficit in autism, and whether this correlates with autism associated differences in somatosensory processing. The findings from examination of GABA MRS and its association with autistic behavior will provide a foundation for investigating novel treatment therapies, specifically use of medications that increase GABAergic activity. In Aim 1, we will measure GABA concentration in a group of 32 typically developing children (TDC) between the age of 8 and 12 years to characterize the typical range. In Aim 2, we will compare twenty children with ASD to twenty TDC to investigate differences in GABAergic inhibition, and perform measures of tactile discrimination to investigate whether the abnormal tactile processing commonly observed in ASD arises from a GABAergic deficit.
NDAR
Funding Completed
Shared
$460,279.00
45
108
7
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NIH - Extramural None


R21MH098228-01 Dysfunction of Sensory Inhibition in Autism 07/01/2013 03/31/2016 108 7 JOHNS HOPKINS UNIVERSITY $460,279.00

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Experiments

To create a new Omics, eye tracking, fMRI, or EEG experiment, press the "+ New Experiment" button. Once an experiment is created, then raw files for these types of experiments should be provided, associating the experiment – through Experiment_ID – with the metadata defined in the experiments interface.

IDNameCreated DateStatusType
No records found.

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Shared Data

Data structures with the number of subjects submitted and shared are provided.

Autism Diagnostic Interview, Revised (ADI-R) Clinical Assessments 24
Autism Diagnostic Observation Schedule, 2nd Edition (ADOS-2) - Module 3 Clinical Assessments 23
Spectroscopy Form Imaging 45
Vibrotactile Behavioral Battery Clinical Assessments 45

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Publications

Publications relevant to NDAR data are listed below. Most displayed publications have been associated with the grant within Pubmed. Use the "+ New Publication" button to add new publications. Publications relevant/not relevant to data expected are categorized. Relevant publications are then linked to the underlying data by selecting the Create Study link. Study provides the ability to define cohorts, assign subjects, define outcome measures and lists the study type, data analysis and results. Analyzed data and results are expected in this way.

PubMed IDStudyTitleJournalAuthorsDateStatus
29316350Create StudyRelationships between autism spectrum disorder and intolerance of uncertainty.Autism research : official journal of the International Society for Autism ResearchVasa RA, Kreiser NL, Keefer A, Singh V, Mostofsky SHJanuary 2018Not Determined
28089657Create StudyAutism spectrum disorder in the scope of tactile processing.Developmental cognitive neuroscienceMikkelsen M, Wodka EL, Mostofsky SH, Puts NADecember 2016Not Relevant
28083565Create StudyThe Disrupted Connectivity Hypothesis of Autism Spectrum Disorders: Time for the Next Phase in Research.Biological psychiatry : cognitive neuroscience and neuroimagingVasa RA, Mostofsky SH, Ewen JBMay 2016Not Determined
27611990Create StudyReduced GABA and altered somatosensory function in children with autism spectrum disorder.Autism research : official journal of the International Society for Autism ResearchPuts NA, Wodka EL, Harris AD, Crocetti D, Tommerdahl M, Mostofsky SH, Edden RASeptember 2016Not Determined
27448580Create StudyThe Role of Attention in Somatosensory Processing: A Multi-trait, Multi-method Analysis.Journal of autism and developmental disordersWodka EL, Puts NA, Mahone EM, Edden RA, Tommerdahl M, Mostofsky SHJuly 2016Not Determined
27429731Create StudyAtypical lateralization of motor circuit functional connectivity in children with autism is associated with motor deficits.Molecular autismFloris DL, Barber AD, Nebel MB, Martinelli M, Lai MC, Crocetti D, Baron-Cohen S, Suckling J, Pekar JJ, Mostofsky SH2016Not Determined
27239903Create StudyProspective frequency correction for macromolecule-suppressed GABA editing at 3T.Journal of magnetic resonance imaging : JMRIEdden RA, Oeltzschner G, Harris AD, Puts NA, Chan KL, Boer VO, Schär M, Barker PBMay 30, 2016Not Relevant
26637451Create StudyLocal GABA Concentration Predicts Perceptual Improvements After Repetitive Sensory Stimulation in Humans.Cerebral cortex (New York, N.Y. : 1991)Heba S, Puts NA, Kalisch T, Glaubitz B, Haag LM, Lenz M, Dinse HR, Edden RA, Tegenthoff M, Schmidt-Wilcke TMarch 2016Not Determined
26041822Create StudyReduced GABAergic inhibition and abnormal sensory symptoms in children with Tourette syndrome.Journal of neurophysiologyPuts NA, Harris AD, Crocetti D, Nettles C, Singer HS, Tommerdahl M, Edden RA, Mostofsky SHAugust 2015Not Determined
25521836Create StudySpectral-editing measurements of GABA in the human brain with and without macromolecule suppression.Magnetic resonance in medicineHarris AD, Puts NA, Barker PB, Edden RADecember 2015Not Determined
25224339Create StudyReply to Dickinson and Milne.Journal of neurophysiologyPuts NA, Wodka EL, Tommerdahl M, Mostofsky SH, Edden RASeptember 15, 2014Not Determined
24523518Create StudyImpaired tactile processing in children with autism spectrum disorder.Journal of neurophysiologyPuts NA, Wodka EL, Tommerdahl M, Mostofsky SH, Edden RAMay 2014Not Determined
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Relevant Publications
PubMed IDStudyTitleJournalAuthorsDate
No records found.
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Data Expected
Data ExpectedTargeted EnrollmentInitial SubmissionSubjects SharedStatus
ADOS info iconApproved
Vibrotactile Behavioral Battery info iconApproved
Spectroscopy info iconApproved
ADI-R info iconApproved
Structure not yet defined

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Associated Studies

Studies that have been defined using data from a Collection are important criteria to determine the value of data shared. The number of subjects column displays the counts from this Collection that are included in a Study, out of the total number of subjects in that study. The Data Use column represents whether or not the study is a primary analysis of the data or a secondary analysis. State indicates whether the study is private or shared with the research community.

Study NameAbstractCollection/Study SubjectsData UsageState
No records found.
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